Projects

DeepBrainDisco: Discovery of microarchitecture in brain imagery with deep learning
Xray-ThC: A three-dimensional X-ray microtomography thalamocortical dataset for characterizing brain heterogeneity
BrainSynth: Deep generative modeling for interpreting population-level variability in brain structure

Balwani A., Dyer E. “A Deep Feature Learning Approach for Mapping the Brain’s Microarchitecture and Organization.” bioRxiv, 2020

Prasad, J., Balwani, A., Johnson, E., Miano, J., Sampathkumar, V., De Andrade, V., … & Dyer, E. ““A three-dimensional thalamocortical dataset for characterizing brain heterogeneity.” Nature Scientific Data, 2020.
Milligan K., Balwani A., Dyer E. “Brain Mapping at High Resolutions: Challenges and Opportunities.” Current Opinion in Biomedical Engineering, 2019.
Lee T., Kumar A., Balwani A., Brittain D., Kinn S., Tovey C., Dyer E., da Costa N., Reid R., Forest C., Bumbarger D. “Large-scale neuroanatomy using LASSO: Loop based Automated Serial Sectioning Operation.” PloS one, 13.10, 2018.

Balwani A.^†, Miano J.^†, Liu R., Kitchell L., Prasad J., Johnson E., Gray-Roncal W., Dyer E. “Multi-Scale Modeling of Neural Structure in X-ray Imagery” to appear, IEEE International Conference on Image Processing (ICIP), 2021.
Liu, R., Subakan, C., Balwani, A., Whitesell, J., Harris, J., Koyejo, S., & Dyer, E. “A generative modeling approach for interpreting population-level variability in brain structure.” International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2020.
Balwani, A., and Dyer E. “Modeling variability in brain architecture with deep feature learning.” 2019 53rd Asilomar Conference on Signals, Systems, and Computers. IEEE, 2019.

Balwani A., Dyer E. “Modeling Brain Microarchitecture with Deep Representation Learning.” (Poster), ML Interpretability for Scientific Discovery, ICML, 2020.
Balwani A., Miano J., Prasad J., Dyer E. “Learning to Segment at Multiple Scales.” (Poster), BioImage Informatics, 2019.
Milligan K., Balwani A., Maguire A., Margulies S., Dyer E. “Deep Learning for Characterization of Neuroinflammation in Traumatic Brain Injury.” (Poster), BioImage Informatics, 2019.